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Cultures

15 microbial cultures behind the encyclopedia's 59 ferments. The dimension-unique innovation: a single bacterium like Bacillus subtilis var. natto connects natto (Japan), doenjang (Korea), doubanjiang (Sichuan), and douchi (broader China) across four distinct culinary traditions — a connection invisible in any substrate-organized view.

Significance
Type
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Acetobacter aceti

8 ferments

Acetic acid bacteria — converts ethanol to acetic acid (vinegar) and produces the cellulose 'mother of vinegar' mat; obligate aerobe distinguishes vinegars from alcoholic ferments

Foundational Single species
麹菌kōji-kin

The koji mold — designated as Japan's kokkin (national microbe), the domesticated descendant of Aspergillus flavus selected for high enzyme production and absence of mycotoxins

Foundational Single species

Aspergillus sojae

3 ferments

The soy-sauce koji — closely related to A. oryzae but adapted to higher-salt environments; the specific organism behind shoyu, tamari, and related ferments

Established Single species
納豆菌nattō-kin

The natto bacterium — Bacillus subtilis variant selected for polyglutamic acid production (the stringy mucilage) and nattokinase enzyme; also contributes to Korean and Chinese soybean ferments

Foundational Single species

The wild beer yeast — slow-fermenting, producing barnyard, horse-blanket, and funky-fruit aromatics; defines lambic, gueuze, and many natural ciders

Established Single species

Kombucha SCOBY

2 ferments
紅茶キノコkōcha kinoko (Japanese; also 海宝 hǎibǎo in Chinese tradition)

The kombucha SCOBY — a layered cellulose mat hosting bacteria and yeasts in symbiosis; converts sweet tea into the tangy, slightly effervescent kombucha drink over 7-14 days

Established Mixed culture

The lactic acid bacteria — the most consequential microbial family in fermented foods, present in dairy, vegetable, grain, and meat ferments worldwide

Foundational Single species

The most acid-tolerant of the major LAB — dominant in the late phase of lacto-vegetable fermentations, drives the final pH to 3.4-4.0

Foundational Single species

The starter of nearly every lacto-vegetable fermentation — heterofermentative, CO₂-producing, opens the anaerobic environment that L. plantarum later completes

Foundational Single species

Milk kefir grains

1 ferment

Cauliflower-like grain-bound community of bacteria and yeasts in a kefiran polysaccharide matrix; ferments fresh milk to milk kefir in 12-48 hours at room temperature

Foundational Mixed culture

The catch-all for ferments where no single organism dominates — wild ambient fermentation expressing climate, substrate, and place across 32 traditions in the encyclopedia

Foundational Mixed culture

The tempeh mold — Rhizopus mycelium binds soybeans into a solid cake; one of the few fungi domesticated for food outside East Asian koji traditions

Foundational Single species

Brewer's, baker's, and wine yeast — the most domesticated microbe in human history, converting sugar to ethanol and CO₂ across thousands of fermentation traditions

Foundational Single species

Water kefir grains

1 ferment
Tibicostibicos (Mexican Spanish) / tibi / aqua kefir

Translucent gel-like grains in dextran matrix; ferments sugar water (often with dried fruit) into a slightly effervescent dairy-free probiotic drink

Established Mixed culture